Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_30295 | Not Available | Negative | 7422752 - 7422955 | 8121.8 |
| hypothetical protein | EHT87_30300 | Not Available | Negative | 7423323 - 7424354 | 39595.5 |
| hypothetical protein | EHT87_30305 | Not Available | Negative | 7424486 - 7425037 | 21071.1 |
| glutathione-dependent formaldehyde dehydrogenase | EHT87_30310 | Not Available | Negative | 7425049 - 7426209 | 41873.8 |
| sensor histidine kinase | EHT87_30315 | Not Available | Negative | 7426811 - 7428076 | 46185.3 |
| voc family protein | EHT87_30320 | Not Available | Negative | 7429057 - 7429515 | 16523.0 |
| response regulator | EHT87_30325 | Not Available | Negative | 7429952 - 7431052 | 41182.4 |
| pas domain s-box protein | EHT87_30330 | Not Available | Negative | 7431054 - 7434425 | 126830.0 |
| dna-binding response regulator | EHT87_30335 | Not Available | Positive | 7434787 - 7435551 | 29278.7 |
| excinuclease abc subunit uvra | EHT87_30340 | Not Available | Positive | 7435822 - 7438518 | 98166.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
