Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_02970 | Not Available | Negative | 749896 - 751023 | 42971.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_02975 | Not Available | Negative | 751135 - 752610 | 54726.0 |
| tonb-dependent receptor | EHT87_02980 | Not Available | Negative | 752694 - 755747 | 109570.0 |
| laci family transcriptional regulator | EHT87_02985 | Not Available | Positive | 756073 - 757092 | 37668.5 |
| duf4255 domain-containing protein | EHT87_02990 | Not Available | Positive | 757345 - 757956 | 23220.6 |
| phage tail protein | EHT87_02995 | Not Available | Positive | 757979 - 760027 | 74643.5 |
| phage tail protein | EHT87_03000 | Not Available | Positive | 760043 - 760474 | 16446.5 |
| phage tail protein | EHT87_03005 | Not Available | Positive | 760478 - 760972 | 18293.8 |
| lysm peptidoglycan-binding domain-containing protein | EHT87_03010 | Not Available | Positive | 761152 - 761859 | 26827.1 |
| type vi secretion system tip protein vgrg | EHT87_03015 | Not Available | Positive | 761891 - 763603 | 61703.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
