Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | EHT87_00240 | Not Available | Positive | 57705 - 58298 | 21489.5 |
| cell surface protein spra | EHT87_00245 | Not Available | Positive | 58463 - 65968 | 283492.0 |
| glycoside hydrolase | EHT87_00250 | Not Available | Positive | 66677 - 68980 | 85938.5 |
| deor/glpr transcriptional regulator | EHT87_00255 | Not Available | Negative | 68995 - 69774 | 28471.5 |
| tonb-dependent receptor | EHT87_00260 | Not Available | Positive | 70151 - 73366 | 115791.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_00265 | Not Available | Positive | 73406 - 74881 | 53068.2 |
| hypothetical protein | EHT87_00275 | Not Available | Positive | 76149 - 77351 | 43223.9 |
| duf4091 domain-containing protein | EHT87_00280 | Not Available | Positive | 77385 - 79301 | 72216.7 |
| duf4832 domain-containing protein | EHT87_00285 | Not Available | Positive | 79313 - 80665 | 50527.4 |
| s9 family peptidase | EHT87_00290 | Not Available | Positive | 80699 - 82669 | 73733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
