Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | EHT87_30045 | Not Available | Positive | 7358605 - 7359234 | 23031.7 |
| hypothetical protein | EHT87_30050 | Not Available | Positive | 7359305 - 7359817 | 18540.8 |
| duf3291 domain-containing protein | EHT87_30055 | Not Available | Positive | 7360135 - 7360773 | 24343.2 |
| noncanonical pyrimidine nucleotidase, yjjg family | EHT87_30060 | Not Available | Negative | 7360763 - 7361455 | 26694.8 |
| (2fe-2s) ferredoxin domain-containing protein | EHT87_30065 | Not Available | Negative | 7361543 - 7361848 | 11156.6 |
| rna polymerase sigma factor | EHT87_30070 | Not Available | Positive | 7362256 - 7362855 | 23654.3 |
| hypothetical protein | EHT87_30075 | Not Available | Positive | 7362830 - 7363066 | 9096.79 |
| endonuclease iii | EHT87_30080 | Not Available | Positive | 7363201 - 7363854 | 24799.1 |
| nucleoside-diphosphate kinase | EHT87_30085 | Not Available | Negative | 7363922 - 7364341 | 15273.2 |
| bifunctional oligoribonuclease/pap phosphatase nrna | EHT87_30090 | Not Available | Positive | 7364450 - 7365466 | 37851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
