Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | EHT87_29895 | Not Available | Negative | 7325367 - 7325993 | 22990.8 |
| phosphoribosylglycinamide formyltransferase | EHT87_29900 | Not Available | Positive | 7326068 - 7326658 | 22207.9 |
| hypothetical protein | EHT87_29905 | Not Available | Positive | 7326722 - 7327099 | 14410.6 |
| duf4834 domain-containing protein | EHT87_29910 | Not Available | Negative | 7327103 - 7327339 | 9117.1 |
| putative toxin-antitoxin system toxin component, pin family | EHT87_29915 | Not Available | Negative | 7327505 - 7327939 | 16498.8 |
| hypothetical protein | EHT87_29920 | Not Available | Negative | 7328026 - 7328241 | 8139.73 |
| carbamoyl-phosphate synthase large subunit | EHT87_29925 | Not Available | Negative | 7328346 - 7331240 | 106861.0 |
| class i sam-dependent methyltransferase | EHT87_29930 | Not Available | Negative | 7331549 - 7332271 | 27783.4 |
| hypothetical protein | EHT87_29935 | Not Available | Positive | 7332509 - 7333984 | 54485.4 |
| class d beta-lactamase | EHT87_29940 | Not Available | Positive | 7333995 - 7334792 | 30424.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
