Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EHT87_29845 | Not Available | Negative | 7313978 - 7314718 | 26346.5 |
| transcriptional regulator | EHT87_29850 | Not Available | Positive | 7314815 - 7315195 | 14138.3 |
| t9ss c-terminal target domain-containing protein | EHT87_29855 | Not Available | Negative | 7315372 - 7315776 | 14295.2 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | EHT87_29860 | Not Available | Negative | 7315916 - 7316770 | 30179.8 |
| alpha/beta hydrolase | EHT87_29865 | Not Available | Positive | 7317141 - 7317965 | 30120.2 |
| pas domain-containing sensor histidine kinase | EHT87_29870 | Not Available | Positive | 7317962 - 7319179 | 45960.7 |
| peptidase m14 | EHT87_29875 | Not Available | Negative | 7319339 - 7321090 | 65849.9 |
| peptidase m14 | EHT87_29880 | Not Available | Negative | 7321177 - 7322853 | 60497.8 |
| sugar phosphate isomerase/epimerase | EHT87_29885 | Not Available | Positive | 7322993 - 7323925 | 34386.1 |
| abc transporter permease | EHT87_29890 | Not Available | Negative | 7324047 - 7325270 | 44590.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
