Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated abc transporter substrate-binding protein gldg | EHT87_29795 | Not Available | Positive | 7302216 - 7303871 | 62375.3 |
| dna polymerase iii subunit beta | EHT87_29800 | Not Available | Positive | 7304053 - 7305189 | 41504.0 |
| dead/deah box helicase | EHT87_29805 | Not Available | Positive | 7305554 - 7308565 | 116212.0 |
| gtra family protein | EHT87_29810 | Not Available | Negative | 7308566 - 7309057 | 18413.7 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EHT87_29815 | Not Available | Positive | 7309361 - 7310512 | 42716.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EHT87_29820 | Not Available | Positive | 7310597 - 7311079 | 16760.4 |
| lysm peptidoglycan-binding domain-containing protein | EHT87_29825 | Not Available | Positive | 7311175 - 7311996 | 29679.4 |
| dabb family protein | EHT87_29830 | Not Available | Positive | 7312067 - 7312453 | 14310.3 |
| ycxb family protein | EHT87_29835 | Not Available | Negative | 7312518 - 7313090 | 22391.8 |
| phosphoribosyltransferase | EHT87_29840 | Not Available | Positive | 7313281 - 7313790 | 19108.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
