Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c class i | EHT87_29495 | Not Available | Positive | 7231798 - 7233267 | 54473.5 |
| aminotransferase class v-fold plp-dependent enzyme | EHT87_29500 | Not Available | Positive | 7233278 - 7234495 | 44059.0 |
| amidohydrolase/deacetylase family metallohydrolase | EHT87_29505 | Not Available | Positive | 7234624 - 7235904 | 46756.7 |
| bile acid:sodium symporter family protein | EHT87_29510 | Not Available | Positive | 7236156 - 7237268 | 39722.3 |
| smp-30/gluconolactonase/lre family protein | EHT87_29515 | Not Available | Positive | 7237570 - 7238499 | 33862.3 |
| response regulator | EHT87_29520 | Not Available | Negative | 7238766 - 7239821 | 40002.0 |
| pas domain-containing sensor histidine kinase | EHT87_29525 | Not Available | Negative | 7239799 - 7241019 | 46026.9 |
| thioredoxin | EHT87_29530 | Not Available | Positive | 7241252 - 7241575 | 11957.8 |
| hypothetical protein | EHT87_29535 | Not Available | Negative | 7241740 - 7242057 | 11922.4 |
| duf4976 domain-containing protein | EHT87_29540 | Not Available | Positive | 7242351 - 7243781 | 53730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
