Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | EHT87_29395 | Not Available | Negative | 7204544 - 7205992 | 54254.5 |
| hypothetical protein | EHT87_29400 | Not Available | Positive | 7206288 - 7207415 | 41393.6 |
| histidinol-phosphatase | EHT87_29405 | Not Available | Negative | 7207526 - 7209454 | 73553.5 |
| cold-shock protein | EHT87_29410 | Not Available | Negative | 7209679 - 7209870 | 7045.34 |
| alpha-glucosidase | EHT87_29415 | Not Available | Negative | 7209976 - 7211838 | 70249.5 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_29420 | Not Available | Negative | 7211930 - 7213597 | 62289.1 |
| susc/raga family tonb-linked outer membrane protein | EHT87_29425 | Not Available | Negative | 7213632 - 7216907 | 121562.0 |
| hypothetical protein | EHT87_29430 | Not Available | Positive | 7216985 - 7217182 | 7250.62 |
| duf4974 domain-containing protein | EHT87_29435 | Not Available | Negative | 7217236 - 7218360 | 42130.2 |
| sigma-70 family rna polymerase sigma factor | EHT87_29440 | Not Available | Positive | 7218591 - 7219214 | 24572.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
