Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EHT87_29345 | Not Available | Positive | 7186108 - 7186662 | 21088.5 |
| hypothetical protein | EHT87_29350 | Not Available | Positive | 7186760 - 7187455 | 27252.2 |
| chat domain-containing protein | EHT87_29355 | Not Available | Negative | 7187452 - 7190238 | 104414.0 |
| chat domain-containing protein | EHT87_29360 | Not Available | Positive | 7190304 - 7193921 | 135437.0 |
| hypothetical protein | EHT87_29365 | Not Available | Positive | 7194023 - 7196089 | 75482.6 |
| duf885 domain-containing protein | EHT87_29370 | Not Available | Negative | 7196117 - 7197847 | 66940.2 |
| glycoside hydrolase family 2 | EHT87_29375 | Not Available | Positive | 7198159 - 7199973 | 68648.7 |
| hypothetical protein | EHT87_29380 | Not Available | Positive | 7200279 - 7201412 | 40725.7 |
| restriction system-associated aaa family atpase | EHT87_29385 | Not Available | Negative | 7201495 - 7202997 | 56814.7 |
| type i restriction endonuclease subunit s | EHT87_29390 | Not Available | Negative | 7202994 - 7204547 | 57762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
