Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_29195 | Not Available | Positive | 7139212 - 7139739 | 18813.3 |
| sigma-70 family rna polymerase sigma factor | EHT87_29200 | Not Available | Positive | 7139810 - 7140385 | 22554.9 |
| hypothetical protein | EHT87_29205 | Not Available | Positive | 7140366 - 7141670 | 47809.4 |
| duf4856 domain-containing protein | EHT87_29210 | Not Available | Positive | 7141854 - 7143035 | 41694.5 |
| peptidase m75, imelysin | EHT87_29215 | Not Available | Positive | 7143127 - 7144284 | 42186.0 |
| httm domain-containing protein | EHT87_29220 | Not Available | Positive | 7144284 - 7145633 | 52237.2 |
| tonb-dependent receptor | EHT87_29225 | Not Available | Positive | 7145614 - 7148040 | 90942.5 |
| glycoside hydrolase family 125 protein | EHT87_29230 | Not Available | Negative | 7148411 - 7149841 | 53946.1 |
| padr family transcriptional regulator | EHT87_29235 | Not Available | Positive | 7150167 - 7150502 | 12368.0 |
| ftsx-like permease family protein | EHT87_29240 | Not Available | Positive | 7150608 - 7153202 | 96797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
