Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | EHT87_28940 | Not Available | Positive | 7078680 - 7081685 | 107262.0 |
| amino acid permease | EHT87_28945 | Not Available | Positive | 7081823 - 7083394 | 57027.4 |
| sulfite exporter taue/safe family protein | EHT87_28950 | Not Available | Positive | 7083523 - 7084323 | 28717.9 |
| mbl fold metallo-hydrolase | EHT87_28955 | Not Available | Positive | 7084320 - 7085726 | 51058.5 |
| nadh-quinone oxidoreductase subunit nuok | EHT87_28960 | Not Available | Negative | 7085803 - 7086111 | 11206.3 |
| nadh-quinone oxidoreductase subunit j | EHT87_28965 | Not Available | Negative | 7086119 - 7086643 | 18964.0 |
| 4fe-4s dicluster domain-containing protein | EHT87_28970 | Not Available | Negative | 7086667 - 7088085 | 51341.1 |
| transketolase | EHT87_28975 | Not Available | Negative | 7088161 - 7090584 | 90998.6 |
| duf1573 domain-containing protein | EHT87_28980 | Not Available | Positive | 7090901 - 7091350 | 15619.7 |
| lps-assembly protein lptd | EHT87_28985 | Not Available | Negative | 7091467 - 7094307 | 105399.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
