Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT87_28790 | Not Available | Negative | 7030913 - 7032394 | 55730.9 |
| tonb-dependent receptor | EHT87_28795 | Not Available | Negative | 7032427 - 7035579 | 114110.0 |
| fad-binding oxidoreductase | EHT87_28800 | Not Available | Positive | 7036122 - 7039076 | 109544.0 |
| hypothetical protein | EHT87_28805 | Not Available | Positive | 7039073 - 7040749 | 63636.6 |
| m1 family peptidase | EHT87_28810 | Not Available | Positive | 7040856 - 7042829 | 74803.1 |
| ketoacyl-acp synthase iii | EHT87_28815 | Not Available | Negative | 7042897 - 7043841 | 34088.9 |
| uma2 family endonuclease | EHT87_28820 | Not Available | Negative | 7044034 - 7044615 | 22453.8 |
| preprotein translocase subunit seca | EHT87_28825 | Not Available | Negative | 7044726 - 7048115 | 128777.0 |
| rna polymerase sigma-70 factor | EHT87_28830 | Not Available | Positive | 7048448 - 7049032 | 23251.6 |
| fecr family protein | EHT87_28835 | Not Available | Positive | 7049106 - 7050122 | 38430.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
