Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | EHT87_28590 | Not Available | Negative | 6989145 - 6989732 | 21660.0 |
| hypothetical protein | EHT87_28595 | Not Available | Negative | 6989761 - 6990456 | 25323.2 |
| rieske (2fe-2s) protein | EHT87_28600 | Not Available | Negative | 6990460 - 6990933 | 17044.2 |
| hypothetical protein | EHT87_28605 | Not Available | Negative | 6991010 - 6992671 | 60946.0 |
| rna polymerase sigma factor | EHT87_28610 | Not Available | Negative | 6992643 - 6993212 | 22141.4 |
| hypothetical protein | EHT87_28615 | Not Available | Negative | 6993380 - 6994234 | 31351.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | EHT87_28620 | Not Available | Negative | 6994391 - 6995638 | 45828.5 |
| gliding motility-associated c-terminal domain-containing protein | EHT87_28625 | Not Available | Positive | 6995856 - 6997856 | 72650.5 |
| ybab/ebfc family nucleoid-associated protein | EHT87_28630 | Not Available | Positive | 6997985 - 6998320 | 12242.9 |
| glycosyltransferase family 2 protein | EHT87_28635 | Not Available | Positive | 6998324 - 6999358 | 39428.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
