Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EHT87_28485 | Not Available | Negative | 6964668 - 6965546 | 32492.0 |
| rna polymerase sigma factor | EHT87_28490 | Not Available | Positive | 6965692 - 6966237 | 21124.3 |
| anti-sigma factor | EHT87_28495 | Not Available | Positive | 6966234 - 6967943 | 62133.6 |
| serpin family protein | EHT87_28500 | Not Available | Positive | 6968072 - 6969316 | 45069.0 |
| meta domain-containing protein | EHT87_28505 | Not Available | Positive | 6969313 - 6969756 | 15942.3 |
| hypothetical protein | EHT87_28510 | Not Available | Positive | 6969957 - 6971255 | 48462.9 |
| hypothetical protein | EHT87_28515 | Not Available | Positive | 6971267 - 6971857 | 22123.8 |
| hypothetical protein | EHT87_28520 | Not Available | Positive | 6971875 - 6972849 | 36149.5 |
| hypothetical protein | EHT87_28525 | Not Available | Positive | 6972960 - 6973175 | 7732.49 |
| translational gtpase typa | EHT87_28530 | Not Available | Negative | 6973234 - 6975048 | 67925.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
