Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | EHT87_28435 | Not Available | Negative | 6950116 - 6950877 | 27035.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EHT87_28440 | Not Available | Negative | 6950920 - 6951639 | 26713.2 |
| imidazole glycerol phosphate synthase subunit hish | EHT87_28445 | Not Available | Negative | 6951710 - 6952309 | 22087.6 |
| duf72 domain-containing protein | EHT87_28450 | Not Available | Negative | 6952479 - 6953405 | 35417.9 |
| valine--trna ligase | EHT87_28455 | Not Available | Positive | 6953608 - 6956274 | 102320.0 |
| hypothetical protein | EHT87_28460 | Not Available | Negative | 6956356 - 6957450 | 41107.1 |
| had family hydrolase | EHT87_28465 | Not Available | Positive | 6957629 - 6958150 | 19589.5 |
| arginine decarboxylase | EHT87_28470 | Not Available | Negative | 6958351 - 6959841 | 57241.8 |
| peptidoglycan synthetase | EHT87_28475 | Not Available | Positive | 6960172 - 6961527 | 50393.1 |
| dehydrogenase | EHT87_28480 | Not Available | Negative | 6961623 - 6964556 | 107725.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
