Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | EHT87_28335 | Not Available | Positive | 6928707 - 6930047 | 50695.9 |
| pyrroline-5-carboxylate reductase | EHT87_28340 | Not Available | Negative | 6930060 - 6930863 | 28689.2 |
| ahpc/tsa family protein | EHT87_28345 | Not Available | Negative | 6930981 - 6932129 | 42141.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | EHT87_28350 | Not Available | Negative | 6932142 - 6933641 | 55648.6 |
| hypothetical protein | EHT87_28355 | Not Available | Positive | 6934020 - 6934442 | 16118.6 |
| phytoene/squalene synthase family protein | EHT87_28360 | Not Available | Negative | 6934491 - 6935327 | 32792.4 |
| phytoene desaturase | EHT87_28365 | Not Available | Negative | 6935405 - 6936877 | 55223.9 |
| rna polymerase sigma factor | EHT87_28370 | Not Available | Negative | 6937176 - 6937688 | 19830.7 |
| tonb-dependent receptor | EHT87_28375 | Not Available | Positive | 6938100 - 6940424 | 86574.2 |
| sdr family nad(p)-dependent oxidoreductase | EHT87_28380 | Not Available | Negative | 6940456 - 6941295 | 30631.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
