Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | EHT87_28135 | Not Available | Negative | 6884417 - 6884656 | 8944.94 |
| ornithine--oxo-acid transaminase | EHT87_28140 | Not Available | Positive | 6885088 - 6886341 | 45955.4 |
| hypothetical protein | EHT87_28145 | Not Available | Positive | 6886399 - 6887916 | 52346.8 |
| hypothetical protein | EHT87_28150 | Not Available | Negative | 6887945 - 6888772 | 31503.0 |
| hypothetical protein | EHT87_28155 | Not Available | Negative | 6888781 - 6889500 | 27395.2 |
| sigma-70 family rna polymerase sigma factor | EHT87_28160 | Not Available | Negative | 6889497 - 6890039 | 20973.2 |
| rna polymerase sigma factor | EHT87_28165 | Not Available | Positive | 6890253 - 6890825 | 22264.6 |
| hypothetical protein | EHT87_28170 | Not Available | Positive | 6890917 - 6891498 | 22882.6 |
| hypothetical protein | EHT87_28175 | Not Available | Positive | 6891518 - 6892534 | 37497.4 |
| cupin domain-containing protein | EHT87_28180 | Not Available | Negative | 6892535 - 6893038 | 18609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
