Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | EHT87_27925 | Not Available | Negative | 6845154 - 6846023 | 31613.0 |
| hypothetical protein | EHT87_27935 | Not Available | Negative | 6846836 - 6848545 | 63515.1 |
| heparinase | EHT87_27940 | Not Available | Negative | 6848929 - 6850821 | 70292.0 |
| duf1801 domain-containing protein | EHT87_27945 | Not Available | Positive | 6851144 - 6851563 | 15579.7 |
| dihydrofolate reductase | EHT87_27950 | Not Available | Positive | 6851737 - 6852330 | 21703.1 |
| duf2200 domain-containing protein | EHT87_27955 | Not Available | Positive | 6852368 - 6852733 | 14108.0 |
| atpase | EHT87_27960 | Not Available | Positive | 6852774 - 6853235 | 17987.3 |
| crp/fnr family transcriptional regulator | EHT87_27965 | Not Available | Positive | 6853278 - 6853841 | 22037.8 |
| alpha/beta hydrolase | EHT87_27970 | Not Available | Positive | 6853915 - 6854853 | 35264.3 |
| nad-dependent epimerase/dehydratase family protein | EHT87_27975 | Not Available | Positive | 6854883 - 6855779 | 33296.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
