Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | EHT87_27820 | Not Available | Negative | 6816945 - 6817394 | 16761.3 |
| hypothetical protein | EHT87_27825 | Not Available | Negative | 6817521 - 6817949 | 16381.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EHT87_27830 | Not Available | Negative | 6817990 - 6819207 | 45205.4 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EHT87_27835 | Not Available | Negative | 6819304 - 6820758 | 53829.6 |
| pasta domain-containing protein | EHT87_27840 | Not Available | Negative | 6820790 - 6822970 | 81429.4 |
| hypothetical protein | EHT87_27845 | Not Available | Negative | 6822967 - 6823368 | 15487.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EHT87_27850 | Not Available | Negative | 6823409 - 6824335 | 34755.6 |
| tlpa family protein disulfide reductase | EHT87_27855 | Not Available | Positive | 6824536 - 6825765 | 45214.2 |
| mfs transporter | EHT87_27860 | Not Available | Positive | 6825891 - 6827165 | 46089.5 |
| hypothetical protein | EHT87_27865 | Not Available | Positive | 6827512 - 6828156 | 24142.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
