Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4249 domain-containing protein | EHT87_02710 | Not Available | Negative | 677553 - 678554 | 37816.8 |
| tonb-dependent receptor | EHT87_02715 | Not Available | Negative | 678554 - 680911 | 87950.1 |
| deoxyribodipyrimidine photo-lyase | EHT87_02720 | Not Available | Negative | 681000 - 682328 | 51919.5 |
| nadh-quinone oxidoreductase subunit h | EHT87_02725 | Not Available | Positive | 682537 - 683619 | 39910.1 |
| dead/deah box helicase | EHT87_02730 | Not Available | Positive | 683676 - 684944 | 46197.9 |
| hydrogen peroxide-inducible genes activator | EHT87_02735 | Not Available | Negative | 684941 - 685876 | 35238.0 |
| ferrochelatase | EHT87_02740 | Not Available | Positive | 686131 - 687195 | 40347.8 |
| osmc family peroxiredoxin | EHT87_02750 | Not Available | Negative | 687581 - 688093 | 18133.8 |
| duf4242 domain-containing protein | EHT87_02755 | Not Available | Negative | 688126 - 688398 | 9951.0 |
| tonb-dependent receptor | EHT87_02760 | Not Available | Negative | 688488 - 691382 | 104790.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
