Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketosamine-3-kinase | EHT87_27670 | Not Available | Negative | 6779593 - 6780474 | 33692.1 |
| anhydro-n-acetylmuramic acid kinase | EHT87_27675 | Not Available | Positive | 6780558 - 6781757 | 43872.3 |
| l-2-hydroxyglutarate oxidase | EHT87_27680 | Not Available | Positive | 6781770 - 6782966 | 44466.6 |
| hypothetical protein | EHT87_27685 | Not Available | Positive | 6783100 - 6783939 | 31107.4 |
| acyltransferase | EHT87_27690 | Not Available | Positive | 6784151 - 6785290 | 42375.2 |
| aldose 1-epimerase family protein | EHT87_27695 | Not Available | Negative | 6785568 - 6786434 | 32953.9 |
| mfs transporter | EHT87_27700 | Not Available | Positive | 6786511 - 6787761 | 44759.1 |
| hypothetical protein | EHT87_27705 | Not Available | Positive | 6787767 - 6788282 | 20081.1 |
| thiopurine s-methyltransferase | EHT87_27710 | Not Available | Positive | 6788591 - 6789286 | 26952.2 |
| xylosidase | EHT87_27715 | Not Available | Negative | 6789293 - 6790591 | 48818.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
