Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | EHT87_27370 | Not Available | Negative | 6711272 - 6712708 | 52492.2 |
| lysr family transcriptional regulator | EHT87_27375 | Not Available | Positive | 6712802 - 6713725 | 35082.8 |
| alpha-2-macroglobulin family protein | EHT87_27380 | Not Available | Positive | 6713862 - 6719321 | 199814.0 |
| glycoside hydrolase | EHT87_27385 | Not Available | Positive | 6719873 - 6721819 | 73453.5 |
| dna-binding response regulator | EHT87_27390 | Not Available | Negative | 6721836 - 6722576 | 28069.1 |
| hypothetical protein | EHT87_27395 | Not Available | Negative | 6722584 - 6724518 | 74275.7 |
| hypothetical protein | EHT87_27400 | Not Available | Positive | 6724554 - 6726278 | 61174.2 |
| t9ss c-terminal target domain-containing protein | EHT87_27405 | Not Available | Positive | 6726348 - 6728630 | 80901.5 |
| hypothetical protein | EHT87_27410 | Not Available | Positive | 6728642 - 6729079 | 15424.7 |
| hypothetical protein | EHT87_27415 | Not Available | Negative | 6729142 - 6729438 | 11285.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
