Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EHT87_27315 | Not Available | Positive | 6700455 - 6700925 | 18099.4 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | EHT87_27320 | Not Available | Positive | 6700960 - 6703413 | 90318.9 |
| hypothetical protein | EHT87_27330 | Not Available | Positive | 6703611 - 6703835 | 8588.19 |
| type ii toxin-antitoxin system vapc family toxin | EHT87_27335 | Not Available | Positive | 6703832 - 6704227 | 14823.1 |
| acetyl-coa c-acyltransferase | EHT87_27340 | Not Available | Positive | 6704262 - 6705437 | 41384.8 |
| lysm peptidoglycan-binding domain-containing protein | EHT87_27345 | Not Available | Negative | 6705471 - 6707549 | 78257.9 |
| acyl-coa dehydrogenase | EHT87_27350 | Not Available | Positive | 6707804 - 6709603 | 65980.9 |
| general stress protein | EHT87_27355 | Not Available | Negative | 6709745 - 6710269 | 19519.7 |
| hypothetical protein | EHT87_27360 | Not Available | Negative | 6710380 - 6710940 | 20419.0 |
| hypothetical protein | EHT87_27365 | Not Available | Negative | 6710957 - 6711208 | 9740.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
