Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | EHT87_27215 | Not Available | Negative | 6673669 - 6676017 | 87148.9 |
| mbl fold metallo-hydrolase | EHT87_27220 | Not Available | Positive | 6676169 - 6677581 | 52728.2 |
| Trna-leu | Not Available | Not Available | Positive | 6677716 - 6677799 | Not Available |
| peptidase m48 | EHT87_27230 | Not Available | Positive | 6678452 - 6679927 | 54806.8 |
| hypothetical protein | EHT87_27235 | Not Available | Negative | 6680051 - 6680311 | 10075.4 |
| nad(p)-dependent alcohol dehydrogenase | EHT87_27240 | Not Available | Negative | 6680585 - 6681628 | 37551.2 |
| gfo/idh/moca family oxidoreductase | EHT87_27245 | Not Available | Positive | 6681966 - 6683225 | 46369.3 |
| sugar phosphate isomerase/epimerase | EHT87_27250 | Not Available | Positive | 6683231 - 6684169 | 35039.3 |
| hypothetical protein | EHT87_27255 | Not Available | Negative | 6684296 - 6684586 | 10262.6 |
| hypothetical protein | EHT87_27260 | Not Available | Positive | 6685420 - 6685836 | 16212.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
