Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | EHT87_02660 | Not Available | Negative | 663627 - 664685 | 39735.8 |
| duf2236 domain-containing protein | EHT87_02665 | Not Available | Positive | 664829 - 666805 | 75080.0 |
| hypothetical protein | EHT87_02670 | Not Available | Positive | 666824 - 668800 | 75638.5 |
| hypothetical protein | EHT87_02675 | Not Available | Negative | 668851 - 669075 | 8511.82 |
| sugar phosphate isomerase/epimerase | EHT87_02680 | Not Available | Negative | 669408 - 670271 | 32224.9 |
| duf4965 domain-containing protein | EHT87_02685 | Not Available | Negative | 670294 - 672783 | 91507.5 |
| nadp-dependent oxidoreductase | EHT87_02690 | Not Available | Positive | 673128 - 674120 | 35403.4 |
| arac family transcriptional regulator | EHT87_02695 | Not Available | Positive | 674107 - 675024 | 35213.3 |
| lytic transglycosylase domain-containing protein | EHT87_02700 | Not Available | Positive | 675233 - 676477 | 46378.3 |
| duf4249 domain-containing protein | EHT87_02705 | Not Available | Negative | 676478 - 677515 | 38298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
