Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | EHT87_27165 | Not Available | Positive | 6663299 - 6664021 | 27185.5 |
| padr family transcriptional regulator | EHT87_27170 | Not Available | Positive | 6664126 - 6664452 | 11991.5 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | EHT87_27175 | Not Available | Positive | 6664584 - 6666131 | 60347.3 |
| 5-formyltetrahydrofolate cyclo-ligase | EHT87_27180 | Not Available | Positive | 6666329 - 6666922 | 22719.9 |
| class a beta-lactamase-related serine hydrolase | EHT87_27185 | Not Available | Positive | 6667025 - 6668125 | 41027.2 |
| inositol oxygenase | EHT87_27190 | Not Available | Positive | 6668207 - 6669070 | 33904.6 |
| sodium:solute symporter | EHT87_27195 | Not Available | Positive | 6669321 - 6670709 | 50362.9 |
| nudix domain-containing protein | EHT87_27200 | Not Available | Negative | 6671033 - 6671485 | 16720.2 |
| thua domain-containing protein | EHT87_27205 | Not Available | Positive | 6671567 - 6672295 | 27182.3 |
| gfo/idh/moca family oxidoreductase | EHT87_27210 | Not Available | Negative | 6672409 - 6673575 | 42823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
