Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | EHT87_27115 | Not Available | Negative | 6653009 - 6653344 | 12474.1 |
| m61 family peptidase | EHT87_27120 | Not Available | Positive | 6653585 - 6655066 | 57370.8 |
| hypothetical protein | EHT87_27125 | Not Available | Negative | 6655071 - 6655325 | 8827.3 |
| excinuclease abc subunit uvrb | EHT87_27130 | Not Available | Positive | 6655483 - 6657513 | 77356.9 |
| peptide chain release factor 1 | EHT87_27135 | Not Available | Negative | 6657558 - 6658631 | 40657.4 |
| hypothetical protein | EHT87_27140 | Not Available | Positive | 6658872 - 6659462 | 22263.1 |
| duf2975 domain-containing protein | EHT87_27145 | Not Available | Positive | 6659609 - 6660286 | 25420.4 |
| transcriptional regulator | EHT87_27150 | Not Available | Positive | 6660291 - 6660539 | 8915.9 |
| class a beta-lactamase-related serine hydrolase | EHT87_27155 | Not Available | Positive | 6660577 - 6661677 | 40335.7 |
| gfo/idh/moca family oxidoreductase | EHT87_27160 | Not Available | Positive | 6661852 - 6663201 | 49581.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
