Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | EHT87_26965 | Not Available | Positive | 6619728 - 6621680 | 75594.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | EHT87_26970 | Not Available | Negative | 6621708 - 6623063 | 49293.4 |
| marr family transcriptional regulator | EHT87_26975 | Not Available | Negative | 6623143 - 6623667 | 19819.1 |
| hlyd family secretion protein | EHT87_26980 | Not Available | Positive | 6623890 - 6624975 | 39583.1 |
| dha2 family efflux mfs transporter permease subunit | EHT87_26985 | Not Available | Positive | 6624979 - 6626559 | 57060.5 |
| tolc family protein | EHT87_26990 | Not Available | Positive | 6626625 - 6627926 | 48177.3 |
| acyl carrier protein | EHT87_26995 | Not Available | Positive | 6628070 - 6628309 | 9067.75 |
| 2-phosphosulfolactate phosphatase | EHT87_27000 | Not Available | Negative | 6628386 - 6629102 | 26474.1 |
| glycine cleavage system aminomethyltransferase gcvt | EHT87_27005 | Not Available | Negative | 6629206 - 6630300 | 40138.1 |
| carboxypeptidase-like regulatory domain-containing protein | EHT87_27010 | Not Available | Positive | 6630406 - 6631314 | 33784.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
