Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | EHT87_26915 | Not Available | Positive | 6613026 - 6613553 | 19668.0 |
| nadh-quinone oxidoreductase subunit d | EHT87_26920 | Not Available | Negative | 6613550 - 6614785 | 46717.6 |
| 50s ribosomal protein l33 | EHT87_26925 | Not Available | Positive | 6614961 - 6615143 | 7011.59 |
| duf4295 domain-containing protein | EHT87_26930 | Not Available | Positive | 6615177 - 6615332 | 5492.88 |
| signal recognition particle-docking protein ftsy | EHT87_26935 | Not Available | Positive | 6615474 - 6616433 | 35036.3 |
| nucleotidyltransferase domain-containing protein | EHT87_26940 | Not Available | Positive | 6616438 - 6616797 | 13631.2 |
| hepn domain-containing protein | EHT87_26945 | Not Available | Positive | 6616766 - 6617140 | 14594.3 |
| hypothetical protein | EHT87_26950 | Not Available | Positive | 6617133 - 6617606 | 17372.9 |
| hypothetical protein | EHT87_26955 | Not Available | Positive | 6617612 - 6618253 | 24956.3 |
| 30s ribosomal protein s12 methylthiotransferase rimo | EHT87_26960 | Not Available | Positive | 6618347 - 6619657 | 49440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
