Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | EHT87_26865 | Not Available | Negative | 6600525 - 6600986 | 18079.0 |
| omph family outer membrane protein | EHT87_26870 | Not Available | Negative | 6601543 - 6602139 | 22663.0 |
| hypothetical protein | EHT87_26875 | Not Available | Negative | 6602213 - 6602575 | 12911.3 |
| penicillin acylase family protein | EHT87_26880 | Not Available | Negative | 6602580 - 6605015 | 91405.5 |
| hypothetical protein | EHT87_26885 | Not Available | Positive | 6605216 - 6606742 | 58205.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EHT87_26890 | Not Available | Positive | 6606818 - 6608059 | 47141.2 |
| sugar phosphate isomerase/epimerase | EHT87_26895 | Not Available | Positive | 6608223 - 6609065 | 31106.0 |
| glycoside hydrolase | EHT87_26900 | Not Available | Negative | 6609153 - 6610694 | 59919.7 |
| lrp/asnc family transcriptional regulator | EHT87_26905 | Not Available | Positive | 6611113 - 6611583 | 17193.1 |
| tetratricopeptide repeat protein | EHT87_26910 | Not Available | Negative | 6611682 - 6612902 | 47319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
