Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EHT87_26610 | Not Available | Positive | 6538176 - 6538784 | 23806.6 |
| duf4974 domain-containing protein | EHT87_26615 | Not Available | Positive | 6539093 - 6540208 | 42098.2 |
| susc/raga family tonb-linked outer membrane protein | EHT87_26620 | Not Available | Positive | 6540419 - 6543868 | 126326.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_26625 | Not Available | Positive | 6543911 - 6545644 | 64778.6 |
| hypothetical protein | EHT87_26630 | Not Available | Positive | 6545888 - 6546874 | 36621.7 |
| pyrroloquinoline quinone-dependent dehydrogenase | EHT87_26635 | Not Available | Positive | 6546903 - 6549122 | 80628.8 |
| starvation-sensing protein rspa | EHT87_26640 | Not Available | Positive | 6549289 - 6550632 | 49452.3 |
| beta-glucosidase | EHT87_26650 | Not Available | Negative | 6553008 - 6554615 | 61559.8 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_26655 | Not Available | Negative | 6554728 - 6556206 | 54100.0 |
| tonb-dependent receptor | EHT87_26660 | Not Available | Negative | 6556227 - 6559199 | 107238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
