Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | EHT87_26360 | Not Available | Positive | 6490781 - 6491590 | 28827.3 |
| type ii toxin-antitoxin system vapc family toxin | EHT87_26365 | Not Available | Negative | 6491623 - 6492015 | 14992.1 |
| hypothetical protein | EHT87_26370 | Not Available | Negative | 6492022 - 6492258 | 8838.72 |
| hypothetical protein | EHT87_26375 | Not Available | Negative | 6492308 - 6492823 | 20000.8 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | EHT87_26380 | Not Available | Negative | 6493016 - 6494551 | 56120.7 |
| utp--glucose-1-phosphate uridylyltransferase | EHT87_26385 | Not Available | Negative | 6494698 - 6498036 | 124550.0 |
| nucleotidyl transferase | EHT87_26390 | Not Available | Negative | 6498040 - 6498987 | 34815.0 |
| low molecular weight phosphotyrosine protein phosphatase | EHT87_26395 | Not Available | Negative | 6499172 - 6499699 | 20057.4 |
| septum formation initiator family protein | EHT87_26400 | Not Available | Negative | 6499756 - 6500067 | 12175.8 |
| phosphopyruvate hydratase | EHT87_26405 | Not Available | Negative | 6500146 - 6501423 | 46207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
