Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2892 domain-containing protein | EHT87_00190 | Not Available | Positive | 46218 - 46430 | 7690.89 |
| crp/fnr family transcriptional regulator | EHT87_00195 | Not Available | Positive | 46480 - 47115 | 24365.6 |
| sulfite exporter taue/safe family protein | EHT87_00200 | Not Available | Positive | 47188 - 47985 | 28049.2 |
| mbl fold metallo-hydrolase | EHT87_00205 | Not Available | Positive | 48113 - 49525 | 51128.3 |
| yeee/yede family protein | EHT87_00210 | Not Available | Positive | 49573 - 50145 | 20751.9 |
| transporter | EHT87_00215 | Not Available | Positive | 50163 - 50645 | 17564.8 |
| alpha-l-rhamnosidase | EHT87_00220 | Not Available | Negative | 50660 - 53464 | 103875.0 |
| nadp-dependent oxidoreductase | EHT87_00225 | Not Available | Negative | 53643 - 54584 | 33170.8 |
| arac family transcriptional regulator | EHT87_00230 | Not Available | Positive | 54676 - 55518 | 32867.5 |
| lysm peptidoglycan-binding domain-containing protein | EHT87_00235 | Not Available | Positive | 55989 - 57566 | 60001.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
