Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone-dependent dehydrogenase | EHT87_02405 | Not Available | Negative | 603021 - 605135 | 76935.4 |
| l-serine ammonia-lyase | EHT87_02410 | Not Available | Positive | 605249 - 606625 | 49032.1 |
| hypothetical protein | EHT87_02415 | Not Available | Negative | 606636 - 606974 | 12628.4 |
| sugar phosphate isomerase/epimerase | EHT87_02420 | Not Available | Positive | 607102 - 608142 | 38034.6 |
| ftsx-like permease family protein | EHT87_02425 | Not Available | Positive | 608985 - 611381 | 89300.3 |
| ai-2e family transporter | EHT87_02430 | Not Available | Positive | 611501 - 612574 | 39723.1 |
| dihydrofolate reductase | EHT87_02435 | Not Available | Negative | 612632 - 613144 | 19206.1 |
| arac family transcriptional regulator | EHT87_02440 | Not Available | Negative | 613211 - 614044 | 32088.3 |
| glycoside hydrolase family 127 protein | EHT87_02445 | Not Available | Negative | 614214 - 616169 | 72533.9 |
| exodeoxyribonuclease v | EHT87_02450 | Not Available | Negative | 616182 - 619526 | 128272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
