Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_02355 | Not Available | Negative | 590122 - 591708 | 57758.2 |
| susc/raga family tonb-linked outer membrane protein | EHT87_02360 | Not Available | Negative | 591820 - 595029 | 116595.0 |
| mosc domain-containing protein | EHT87_02365 | Not Available | Positive | 595504 - 596013 | 18065.9 |
| had family phosphatase | EHT87_02370 | Not Available | Negative | 595980 - 596654 | 25068.0 |
| mfs transporter | EHT87_02375 | Not Available | Negative | 596737 - 597930 | 41010.9 |
| arac family transcriptional regulator | EHT87_02380 | Not Available | Positive | 598074 - 598922 | 32514.8 |
| nudix hydrolase | EHT87_02385 | Not Available | Positive | 598935 - 599615 | 26219.3 |
| ribose-phosphate pyrophosphokinase | EHT87_02390 | Not Available | Positive | 599718 - 600563 | 30510.0 |
| nicotinate phosphoribosyltransferase | EHT87_02395 | Not Available | Positive | 600560 - 602017 | 54383.9 |
| sdr family oxidoreductase | EHT87_02400 | Not Available | Positive | 602136 - 603017 | 31670.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
