Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EHT87_02305 | Not Available | Negative | 576016 - 577203 | 43302.3 |
| tolc family protein | EHT87_02310 | Not Available | Negative | 577228 - 578502 | 48854.1 |
| hypothetical protein | EHT87_02315 | Not Available | Negative | 578593 - 578871 | 10287.5 |
| carboxypeptidase-like regulatory domain-containing protein | EHT87_02320 | Not Available | Negative | 579211 - 581913 | 103756.0 |
| m24 family metallopeptidase | EHT87_02325 | Not Available | Positive | 582107 - 583468 | 51878.3 |
| hypothetical protein | EHT87_02330 | Not Available | Negative | 583793 - 584011 | 8224.28 |
| class ii fructose-bisphosphate aldolase | EHT87_02335 | Not Available | Negative | 584714 - 585793 | 39384.6 |
| tannase/feruloyl esterase family alpha/beta hydrolase | EHT87_02340 | Not Available | Positive | 586047 - 587672 | 58495.3 |
| amidohydrolase | EHT87_02345 | Not Available | Negative | 587811 - 589277 | 52626.8 |
| hypothetical protein | EHT87_02350 | Not Available | Negative | 589362 - 589976 | 21617.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
