Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_02255 | Not Available | Negative | 563472 - 563717 | 8827.68 |
| pas domain s-box protein | EHT87_02260 | Not Available | Positive | 563903 - 565120 | 44783.5 |
| alpha/beta hydrolase | EHT87_02265 | Not Available | Positive | 565322 - 566080 | 27229.5 |
| penicillin acylase family protein | EHT87_02270 | Not Available | Positive | 566103 - 568553 | 91934.8 |
| hypothetical protein | EHT87_02275 | Not Available | Negative | 568813 - 569493 | 24753.1 |
| gntr family transcriptional regulator | EHT87_02280 | Not Available | Negative | 569514 - 569900 | 15153.2 |
| hypothetical protein | EHT87_02285 | Not Available | Negative | 569902 - 570696 | 30370.7 |
| abc transporter atp-binding protein | EHT87_02290 | Not Available | Negative | 570847 - 571680 | 31295.0 |
| hypothetical protein | EHT87_02295 | Not Available | Negative | 571999 - 572724 | 27619.0 |
| efflux rnd transporter permease subunit | EHT87_02300 | Not Available | Negative | 572795 - 575896 | 113537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
