Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_02105 | Not Available | Negative | 529580 - 530002 | 15797.2 |
| dna repair protein recn | EHT87_02110 | Not Available | Negative | 530035 - 531699 | 62561.6 |
| hypothetical protein | EHT87_02115 | Not Available | Negative | 531709 - 531951 | 9088.97 |
| duf4835 family protein | EHT87_02120 | Not Available | Negative | 531955 - 532872 | 35035.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EHT87_02125 | Not Available | Negative | 532869 - 534095 | 44844.3 |
| dna-directed rna polymerase subunit omega | EHT87_02130 | Not Available | Negative | 534219 - 534539 | 12075.1 |
| outer membrane protein assembly factor bamd | EHT87_02135 | Not Available | Negative | 534604 - 535491 | 34545.6 |
| t9ss c-terminal target domain-containing protein | EHT87_02140 | Not Available | Negative | 535632 - 536273 | 23872.6 |
| hypothetical protein | EHT87_02145 | Not Available | Negative | 536461 - 538521 | 76100.9 |
| trna lysidine(34) synthetase tils | EHT87_02150 | Not Available | Positive | 538747 - 540111 | 51868.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
