Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | EHT87_01905 | Not Available | Positive | 484831 - 487212 | 88609.5 |
| ftsx-like permease family protein | EHT87_01910 | Not Available | Positive | 487534 - 489969 | 90928.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EHT87_01915 | Not Available | Positive | 490119 - 491294 | 43645.0 |
| prephenate dehydrogenase | EHT87_01920 | Not Available | Positive | 491373 - 492230 | 31262.9 |
| hypothetical protein | EHT87_01925 | Not Available | Negative | 492319 - 493560 | 45230.9 |
| hypothetical protein | EHT87_01930 | Not Available | Positive | 493909 - 494685 | 29900.9 |
| tolc family protein | EHT87_01935 | Not Available | Positive | 494858 - 496168 | 49811.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | EHT87_01940 | Not Available | Positive | 496158 - 497318 | 43041.9 |
| abc transporter permease | EHT87_01945 | Not Available | Positive | 497416 - 498672 | 45944.9 |
| abc transporter atp-binding protein | EHT87_01950 | Not Available | Positive | 498675 - 499361 | 25815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
