Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phopq-activated pathogenicity-like protein pqaa type | EHT87_01755 | Not Available | Negative | 440963 - 442339 | 51571.4 |
| hypothetical protein | EHT87_01760 | Not Available | Negative | 442404 - 443669 | 45307.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_01765 | Not Available | Negative | 443781 - 445421 | 59938.0 |
| susc/raga family tonb-linked outer membrane protein | EHT87_01770 | Not Available | Negative | 445445 - 448852 | 124218.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_01775 | Not Available | Negative | 448968 - 450608 | 59948.2 |
| susc/raga family tonb-linked outer membrane protein | EHT87_01780 | Not Available | Negative | 450630 - 454307 | 134291.0 |
| fecr family protein | EHT87_01785 | Not Available | Negative | 454437 - 455483 | 39222.4 |
| rna polymerase sigma-70 factor | EHT87_01790 | Not Available | Negative | 455665 - 456204 | 21398.2 |
| metallophosphoesterase family protein | EHT87_01795 | Not Available | Negative | 456386 - 457780 | 52605.8 |
| regulator | EHT87_01800 | Not Available | Positive | 457945 - 460194 | 85783.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
