Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | EHT87_01705 | Not Available | Positive | 427607 - 429880 | 82857.9 |
| duf1440 domain-containing protein | EHT87_01710 | Not Available | Positive | 430069 - 430527 | 16640.3 |
| duf1080 domain-containing protein | EHT87_01715 | Not Available | Positive | 430561 - 431268 | 26780.6 |
| hypothetical protein | EHT87_01720 | Not Available | Negative | 431311 - 433629 | 87696.8 |
| degt/dnrj/eryc1/strs family aminotransferase | EHT87_01725 | Not Available | Negative | 433738 - 434967 | 45276.8 |
| hypothetical protein | EHT87_01730 | Not Available | Positive | 435104 - 436387 | 47645.6 |
| hypothetical protein | EHT87_01735 | Not Available | Positive | 436477 - 437655 | 44596.7 |
| gnat family n-acetyltransferase | EHT87_01740 | Not Available | Negative | 437706 - 438143 | 16612.6 |
| glycerophosphodiester phosphodiesterase | EHT87_01745 | Not Available | Negative | 438300 - 439109 | 29915.1 |
| metallophosphoesterase family protein | EHT87_01750 | Not Available | Negative | 439109 - 440890 | 67277.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
