Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EHT87_01450 | Not Available | Positive | 360805 - 361470 | 24170.1 |
| hypothetical protein | EHT87_01455 | Not Available | Negative | 361770 - 362468 | 26328.9 |
| pa0069 family radical sam protein | EHT87_01460 | Not Available | Positive | 362647 - 363708 | 40287.5 |
| dinb family protein | EHT87_01465 | Not Available | Negative | 363715 - 364224 | 19769.6 |
| alpha/beta hydrolase | EHT87_01470 | Not Available | Positive | 364392 - 365246 | 31537.2 |
| sigma-54-dependent fis family transcriptional regulator | EHT87_01475 | Not Available | Negative | 365309 - 366649 | 50053.3 |
| arac family transcriptional regulator | EHT87_01480 | Not Available | Negative | 366683 - 367555 | 33301.7 |
| gfo/idh/moca family oxidoreductase | EHT87_01485 | Not Available | Positive | 367855 - 368973 | 41717.4 |
| dehydrogenase | EHT87_01490 | Not Available | Positive | 369003 - 372782 | 138734.0 |
| ghkl domain-containing protein | EHT87_01495 | Not Available | Negative | 372833 - 374119 | 48844.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
