Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EHT87_01400 | Not Available | Negative | 351087 - 351647 | 22161.4 |
| transketolase family protein | EHT87_01405 | Not Available | Negative | 351704 - 352660 | 34387.4 |
| hypothetical protein | EHT87_01410 | Not Available | Negative | 352657 - 353220 | 20681.8 |
| chromosome segregation protein smc | EHT87_01415 | Not Available | Negative | 353214 - 354236 | 39231.8 |
| transketolase | EHT87_01420 | Not Available | Negative | 354239 - 355096 | 31226.3 |
| thioredoxin-dependent thiol peroxidase | EHT87_01425 | Not Available | Negative | 355170 - 355619 | 17023.2 |
| m23 family metallopeptidase | EHT87_01430 | Not Available | Negative | 355687 - 357681 | 74072.8 |
| faa hydrolase family protein | EHT87_01435 | Not Available | Negative | 357705 - 358316 | 23227.9 |
| m48 family peptidase | EHT87_01440 | Not Available | Positive | 358468 - 359292 | 30147.6 |
| adp-forming succinate--coa ligase subunit beta | EHT87_01445 | Not Available | Negative | 359417 - 360640 | 44034.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
