Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | EHT87_10710 | Not Available | Positive | 2627592 - 2628044 | 16363.0 |
| tonb-dependent receptor | EHT87_10715 | Not Available | Positive | 2628422 - 2631739 | 122193.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_10720 | Not Available | Positive | 2631759 - 2633531 | 66464.5 |
| endonuclease/exonuclease/phosphatase family protein | EHT87_10725 | Not Available | Positive | 2633657 - 2634499 | 32053.2 |
| duf2237 domain-containing protein | EHT87_10730 | Not Available | Positive | 2634530 - 2634895 | 13855.6 |
| radical sam protein | EHT87_10735 | Not Available | Negative | 2635005 - 2636102 | 41448.6 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_10740 | Not Available | Negative | 2636337 - 2637779 | 52774.5 |
| tonb-dependent receptor | EHT87_10745 | Not Available | Negative | 2637793 - 2641362 | 129775.0 |
| duf4974 domain-containing protein | EHT87_10750 | Not Available | Negative | 2641380 - 2642402 | 38998.8 |
| sigma-70 family rna polymerase sigma factor | EHT87_10755 | Not Available | Negative | 2642492 - 2643100 | 23473.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
