Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | EHT87_10605 | Not Available | Positive | 2600600 - 2602171 | 59391.0 |
| voc family protein | EHT87_10615 | Not Available | Positive | 2604545 - 2604910 | 13149.6 |
| peptidoglycan-binding protein lysm | EHT87_10620 | Not Available | Negative | 2605109 - 2605582 | 16938.4 |
| port family protein | EHT87_10625 | Not Available | Positive | 2605823 - 2606617 | 28637.8 |
| transcriptional regulator | EHT87_10630 | Not Available | Negative | 2606682 - 2607017 | 12841.0 |
| rida family protein | EHT87_10635 | Not Available | Negative | 2607157 - 2607549 | 14361.4 |
| pas domain s-box protein | EHT87_10640 | Not Available | Negative | 2607561 - 2611283 | 139590.0 |
| pkd domain-containing protein | EHT87_10645 | Not Available | Positive | 2611499 - 2611828 | 11992.4 |
| hypothetical protein | EHT87_10650 | Not Available | Positive | 2611843 - 2612685 | 31318.8 |
| hypothetical protein | EHT87_10655 | Not Available | Positive | 2612696 - 2613406 | 26207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
