Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_01000 | Not Available | Negative | 258296 - 259714 | 54567.5 |
| t9ss c-terminal target domain-containing protein | EHT87_01005 | Not Available | Positive | 259750 - 260562 | 30146.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EHT87_01010 | Not Available | Positive | 260642 - 261493 | 31347.6 |
| prolyl 4-hydroxylase subunit alpha | EHT87_01015 | Not Available | Positive | 261480 - 262214 | 27741.3 |
| metal-binding protein | EHT87_01020 | Not Available | Positive | 262211 - 262510 | 11322.8 |
| histidine kinase | EHT87_01025 | Not Available | Positive | 262724 - 263752 | 39011.6 |
| cytochrome c | EHT87_01030 | Not Available | Negative | 263769 - 264749 | 35840.1 |
| dna-3-methyladenine glycosylase 2 family protein | EHT87_01035 | Not Available | Positive | 265009 - 265626 | 23598.6 |
| metallophosphoesterase | EHT87_01040 | Not Available | Negative | 265639 - 266850 | 46194.4 |
| duf4403 family protein | EHT87_01045 | Not Available | Negative | 266937 - 268361 | 53668.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
