Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | EHT87_10405 | Not Available | Negative | 2552927 - 2553856 | 33779.6 |
| tolc family protein | EHT87_10410 | Not Available | Negative | 2553879 - 2555144 | 46901.4 |
| tetr/acrr family transcriptional regulator | EHT87_10415 | Not Available | Negative | 2555215 - 2555832 | 23510.0 |
| glycoside hydrolase family 88 protein | EHT87_10420 | Not Available | Negative | 2555997 - 2557898 | 72313.1 |
| cation-transporting p-type atpase | EHT87_10425 | Not Available | Positive | 2558114 - 2560777 | 96245.3 |
| fad-dependent oxidoreductase | EHT87_10430 | Not Available | Negative | 2561304 - 2562944 | 61377.5 |
| lysr family transcriptional regulator | EHT87_10435 | Not Available | Positive | 2563116 - 2564009 | 33543.6 |
| acyltransferase | EHT87_10440 | Not Available | Positive | 2564235 - 2565377 | 43063.6 |
| hypothetical protein | EHT87_10445 | Not Available | Positive | 2565500 - 2565922 | 15491.5 |
| amidohydrolase family protein | EHT87_10450 | Not Available | Positive | 2565949 - 2567220 | 45855.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
