Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_10350 | Not Available | Negative | 2535579 - 2537261 | 63502.9 |
| susc/raga family tonb-linked outer membrane protein | EHT87_10355 | Not Available | Negative | 2537301 - 2540696 | 123957.0 |
| l-rhamnose mutarotase | EHT87_10360 | Not Available | Negative | 2540926 - 2541240 | 12179.6 |
| glycoside hydrolase family 2 protein | EHT87_10365 | Not Available | Negative | 2541657 - 2544476 | 104452.0 |
| beta-xylosidase | EHT87_10370 | Not Available | Negative | 2544609 - 2546186 | 59230.1 |
| mfs transporter | EHT87_10380 | Not Available | Negative | 2547283 - 2548611 | 48893.0 |
| abc transporter permease | EHT87_10385 | Not Available | Negative | 2548784 - 2549899 | 41666.9 |
| abc transporter permease | EHT87_10390 | Not Available | Negative | 2549896 - 2551002 | 40809.4 |
| abc transporter atp-binding protein | EHT87_10395 | Not Available | Negative | 2551157 - 2551891 | 26922.4 |
| abc transporter atp-binding protein | EHT87_10400 | Not Available | Negative | 2551897 - 2552820 | 34284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
