Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | EHT87_10300 | Not Available | Positive | 2526508 - 2527272 | 29702.6 |
| tonb-dependent receptor | EHT87_10305 | Not Available | Negative | 2527334 - 2530399 | 112331.0 |
| hypothetical protein | EHT87_10310 | Not Available | Negative | 2530560 - 2530886 | 12026.8 |
| periplasmic heavy metal sensor | EHT87_10315 | Not Available | Negative | 2530963 - 2531583 | 24330.7 |
| hypothetical protein | EHT87_10320 | Not Available | Negative | 2531465 - 2531794 | 12811.1 |
| rna polymerase sigma factor | EHT87_10325 | Not Available | Negative | 2531799 - 2532377 | 22382.8 |
| hypothetical protein | EHT87_10330 | Not Available | Positive | 2532498 - 2532953 | 17854.4 |
| hypothetical protein | EHT87_10335 | Not Available | Negative | 2532979 - 2533326 | 13177.8 |
| arac family transcriptional regulator | EHT87_10340 | Not Available | Negative | 2533423 - 2534313 | 35091.9 |
| glycosylase | EHT87_10345 | Not Available | Negative | 2534368 - 2535447 | 40619.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
